Services

Expert guidance at every stage of your project - before data collection and after analysis is complete.

• Experimental design and power analysis
• Sequencing platform and library prep selection
• Statistical approach and pipeline planning

End-to-end bioinformatics pipeline execution using established and novel workflows.

• Quality control and pre-processing
• Reference-based and de novo assembly
• Differential abundance and expression analysis
• Pathway enrichment and functional annotation
• Custom pipeline development for novel data types
• Accessioned data submission to public repositories
• Data storage and backup

Publication-quality figures, tables, and reproducible code.

• Manuscript-ready figures (R/Python)
• Methods/results text and citation support
• Code annotation, documentation, and repository archiving - including PI/investigative team as contributor
• Supplementary data formatting

• Amplicon sequencing (16S, 18S, LSU) 

• Whole genome sequencing 

• Shotgun metagenomics

• Bulk RNA-seq (differential expression) 

• Single-cell RNA-seq (scRNA-seq) 

• Metatranscriptomics 

• LC-MS / GC-MS / NMR data processing 

• Untargeted metabolite profiling 

• Pathway integration with omics data 

• Statistical normalization and annotation